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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891307.1_cds_XP_016446077.1_40970
CDS Infomation

[gene=LOC107771248] [db_xref=GeneID:107771248] [protein=ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like] [protein_id=XP_016446077.1] [location=join(6417..6645,7478..7593,7734..7937,8057..8161,9228..9290,9550..9661,10263..10321,10404..10586,10665..10748)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTTGCTTCTCTCTCCGCTTTCTAGCTCGCCGGTTACTCAAAATCGCGAG
CTGGGTTCTGGTAAATCAACTTTCATATCCAGTCCCAATTTCTCCTTTGCAATTTCTGTT
CACAGTCGCAGGCCAAACGGCGTTCGAGGTTATTGTTACAGGTCTCCGGTAGCTAAGTCT
TTGGACCATATACCCCAAAAATTCAGACAGGAAAATCTCAAAGATGGACTACAAGACAAC
TATAAAAGCGCCCCTCAGTATCTTTACGGCCTTAGTCCTTCACAGATGGATATGTTCATG
ACAGAAGATAACCCAGTCCGGCGACAGTCAGAAAGTGTCACTGAGGATAGTATATCTTCA
GCCAATAACTATCTGAGCAATGGTGGAATGTGGAGTATGTCTGGCATGAATGATCGGGGC
CCCTCGAAATACAGCATGAGCGTCAGCATGTACCGTGGAGGAGCAAGAGGATCTGGAAGA
CCTCGAACTGCGCCTCCTGATTTGCCATCTTTGCTTTTAGACGCTCGAATTGTCTATCTG
GGCATGCCTATTGTACCAGCTGTTACAGAGCTTCTTGTTGCTCAGTTTATGTGGTTGGAT
TATGACAATCCATCAAAGCCTATATACCTATATATAAACTCATCAGGCACACAGAATGAG
AAGATGGAGACTGTTGGTTCTGAAACAGAGGCATATGCCATCGCTGACACAATGGCATAC
TGCAAATCAGATATCTATACAGTGAACTGTGGCATGTCATATGGTCAAGCAGCAATGCTT
CTGTCACTGGGAAAGAAGGGGTTCCGTGCTATGCAGCCAAATTCATCTACAAAATTGTAT
TTACCTAAAGTCAGCAAATCCAGTGGAGCAGTGATAGATNTAATGTTGGCCAAAGAACTA
GATGCAAACACTGAGTATTACCTTGAACTATTAGCAAAAGGAATTGGAAAACCAAAGGAA
GAAATCGAGAAAGATATTCAACGCCCTAAATATCTGCGGGCACAAGAAGCCATTGACTAT
GGCATTGCAGACAAGATAATCGATTCAAGAGACAATGCATTTGAGAAACGGAACTATGAT
GAGATACTCGCCCAATCTAGAGCTATGAGGAAATCCGGACCAGGTGCTCAGGCTGCTCCA
TCTGGCTTCAGGTGA

Peptide Sequence

PEP ID

XP_016446077.1
PEP Infomation

PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSLLLSPLSSSPVTQNRELGSGKSTFISSPNFSFAISVHSRRPNGVRGYCYRSPVAKS
LDHIPQKFRQENLKDGLQDNYKSAPQYLYGLSPSQMDMFMTEDNPVRRQSESVTEDSISS
ANNYLSNGGMWSMSGMNDRGPSKYSMSVSMYRGGARGSGRPRTAPPDLPSLLLDARIVYL
GMPIVPAVTELLVAQFMWLDYDNPSKPIYLYINSSGTQNEKMETVGSETEAYAIADTMAY
CKSDIYTVNCGMSYGQAAMLLSLGKKGFRAMQPNSSTKLYLPKVSKSSGAVIDXMLAKEL
DANTEYYLELLAKGIGKPKEEIEKDIQRPKYLRAQEAIDYGIADKIIDSRDNAFEKRNYD
EILAQSRAMRKSGPGAQAAPSGFR

Transcript Sequence

Gene sequence data has not been registered.